SNRPF
Summary:
| Name | OMIM ID | Ensembl ID | HGNC ID | PHARMGKB ID | Map Location |
|---|---|---|---|---|---|
| small nuclear ribonucleoprotein polypeptide F | MIM:603541 | Ensembl:ENSG00000139343 | HGNC:HGNC:11162 | PA36003 | 12q23.1 |
GO terms in SNRPF
| Term Type | Evidence Type | GO Term ID | GO Des. |
|---|---|---|---|
| CC | TAS | GO:0005654 | nucleoplasm |
| CC | IDA | GO:0005681 | spliceosomal complex |
| CC | IDA | GO:0005683 | U7 snRNP |
| CC | IBA | GO:0005685 | U1 snRNP |
| CC | IDA | GO:0005685 | U1 snRNP |
| CC | IDA | GO:0005687 | U4 snRNP |
| CC | IDA | GO:0005689 | U12-type spliceosomal complex |
| CC | IEA | GO:0005732 | small nucleolar ribonucleoprotein complex |
| CC | IDA | GO:0005829 | cytosol |
| CC | TAS | GO:0005829 | cytosol |
| CC | IDA | GO:0030532 | small nuclear ribonucleoprotein complex |
| CC | IDA | GO:0034709 | methylosome |
| CC | IDA | GO:0034715 | pICln-Sm protein complex |
| CC | IDA | GO:0034719 | SMN-Sm protein complex |
| CC | IDA | GO:0071007 | U2-type catalytic step 2 spliceosome |
| CC | IBA | GO:0071013 | catalytic step 2 spliceosome |
| CC | IDA | GO:0071013 | catalytic step 2 spliceosome |
| BP | IDA | GO:0000387 | spliceosomal snRNP assembly |
| BP | TAS | GO:0000387 | spliceosomal snRNP assembly |
| BP | IBA | GO:0000398 | mRNA splicing, via spliceosome |
| BP | IC | GO:0000398 | mRNA splicing, via spliceosome |
| BP | TAS | GO:0000398 | mRNA splicing, via spliceosome |
| BP | TAS | GO:0006369 | termination of RNA polymerase II transcription |
| BP | TAS | GO:0008334 | histone mRNA metabolic process |
| BP | IMP | GO:0008380 | RNA splicing |
| BP | TAS | GO:0051170 | import into nucleus |
| MF | IBA | GO:0003723 | RNA binding |
| MF | IMP | GO:0003723 | RNA binding |
| MF | IPI | GO:0005515 | protein binding |
Gene expression in normal tissue: SNRPF
Gene-model tissue-cancer distribution: Bubble Plot
Gene-drug pathway distribution
Pathways in SNRPF
| Database | Pathway ID | Pathway Des. |
|---|---|---|
| wikipathways | WP411 | mRNA Processing |
| kegg | hsa03040 | Spliceosome - Homo sapiens (human) |
| reactome | R-HSA-109688 | Cleavage of Growing Transcript in the Termination Region |
| reactome | R-HSA-111367 | SLBP independent Processing of Histone Pre-mRNAs |
| reactome | R-HSA-191859 | snRNP Assembly |
| reactome | R-HSA-194441 | Metabolism of non-coding RNA |
| reactome | R-HSA-72163 | mRNA Splicing - Major Pathway |
| reactome | R-HSA-72165 | mRNA Splicing - Minor Pathway |
| reactome | R-HSA-72172 | mRNA Splicing |
| reactome | R-HSA-72203 | Processing of Capped Intron-Containing Pre-mRNA |
| reactome | R-HSA-73856 | RNA Polymerase II Transcription Termination |
| reactome | R-HSA-73857 | RNA Polymerase II Transcription |
| reactome | R-HSA-74160 | Gene expression (Transcription) |
| reactome | R-HSA-75067 | Processing of Capped Intronless Pre-mRNA |
| reactome | R-HSA-77588 | SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs |
| reactome | R-HSA-8953854 | Metabolism of RNA |
Gene in drug-gene network: Network Plot
Gene-drug targets distribution
Gene Structure: PDB
Models in SNRPF
CLASSFICATION
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