TAF9


Summary: Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the smaller subunits of TFIID that binds to the basal transcription factor GTF2B as well as to several transcriptional activators such as p53 and VP16. In human, TAF9 and AK6 (GeneID: 102157402) are two distinct genes that share 5' exons. A similar but distinct gene (TAF9L) has been found on the X chromosome and a pseudogene has been identified on chromosome 19. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2013].

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GO terms in TAF9


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Term Type
Evidence Type
GO Term ID
GO Des.
MF IBA GO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly
MF IPI GO:0002039 p53 binding
MF IDA GO:0003677 DNA binding
MF IDA GO:0003713 transcription coactivator activity
MF IMP GO:0003713 transcription coactivator activity
MF IBA GO:0004402 histone acetyltransferase activity
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Gene expression in normal tissue: TAF9

Gene-model tissue-cancer distribution: Bubble Plot

undefinetissue: undefine cancer: undefined model num: 0undefinedtissue: undefined cancer: PANCAN model num: 3

Gene-drug pathway distribution

Protein stability and degradation1Metabolic pathways1

Pathways in TAF9


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Database
Pathway ID
Pathway Des.
reactome R-HSA-162587 HIV Life Cycle
reactome R-HSA-162599 Late Phase of HIV Life Cycle
reactome R-HSA-162906 HIV Infection
reactome R-HSA-1643685 Disease
reactome R-HSA-167161 HIV Transcription Initiation
reactome R-HSA-167162 RNA Polymerase II HIV Promoter Escape
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Gene-Drug: Aster Plot


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Drug ID
Drug Name
Model Num.
iGMDRD68 Paclitaxel 2
iGMDRD309 17AAG 1
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Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in TAF9

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Model
Level
Reference ID
Tissue
Cancer
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Clinical Response
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