TAF9
Summary: Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the smaller subunits of TFIID that binds to the basal transcription factor GTF2B as well as to several transcriptional activators such as p53 and VP16. In human, TAF9 and AK6 (GeneID: 102157402) are two distinct genes that share 5' exons. A similar but distinct gene (TAF9L) has been found on the X chromosome and a pseudogene has been identified on chromosome 19. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2013].
Name | OMIM ID | Ensembl ID | HGNC ID | PHARMGKB ID | Map Location |
---|---|---|---|---|---|
OMIM IDMIM:600822 Ensembl IDEnsembl:ENSG00000273841 HGNC IDHGNC:HGNC:11542 PHARMGKB IDPA36317 Map Location5q13.2 |
GO terms in TAF9
Term Type | Evidence Type | GO Term ID | GO Des. |
---|---|---|---|
MF | IBA | GO:0001075 | transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly |
MF | IPI | GO:0002039 | p53 binding |
MF | IDA | GO:0003677 | DNA binding |
MF | IDA | GO:0003713 | transcription coactivator activity |
MF | IMP | GO:0003713 | transcription coactivator activity |
MF | IBA | GO:0004402 | histone acetyltransferase activity |
Gene expression in normal tissue: TAF9
Gene-model tissue-cancer distribution: Bubble Plot
Gene-drug pathway distribution
Pathways in TAF9
Database | Pathway ID | Pathway Des. |
---|---|---|
reactome | R-HSA-162587 | HIV Life Cycle |
reactome | R-HSA-162599 | Late Phase of HIV Life Cycle |
reactome | R-HSA-162906 | HIV Infection |
reactome | R-HSA-1643685 | Disease |
reactome | R-HSA-167161 | HIV Transcription Initiation |
reactome | R-HSA-167162 | RNA Polymerase II HIV Promoter Escape |
Gene-Drug: Aster Plot
Gene in drug-gene network: Network Plot

Gene-drug targets distribution
Gene Structure: PDB
Models in TAF9
Model | Level | Reference ID | Tissue | Cancer | Drug | Clinical Response | Source | |
---|---|---|---|---|---|---|---|---|
No matching records found |