HSPG2
Summary: This gene encodes the perlecan protein, which consists of a core protein to which three long chains of glycosaminoglycans (heparan sulfate or chondroitin sulfate) are attached. The perlecan protein is a large multidomain proteoglycan that binds to and cross-links many extracellular matrix components and cell-surface molecules. It has been shown that this protein interacts with laminin, prolargin, collagen type IV, FGFBP1, FBLN2, FGF7 and transthyretin, etc., and it plays essential roles in multiple biological activities. Perlecan is a key component of the vascular extracellular matrix, where it helps to maintain the endothelial barrier function. It is a potent inhibitor of smooth muscle cell proliferation and is thus thought to help maintain vascular homeostasis. It can also promote growth factor (e.g., FGF2) activity and thus stimulate endothelial growth and re-generation. It is a major component of basement membranes, where it is involved in the stabilization of other molecules as well as being involved with glomerular permeability to macromolecules and cell adhesion. Mutations in this gene cause Schwartz-Jampel syndrome type 1, Silverman-Handmaker type of dyssegmental dysplasia, and tardive dyskinesia. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2014].
Name | OMIM ID | Ensembl ID | HGNC ID | PHARMGKB ID | Map Location |
---|---|---|---|---|---|
heparan sulfate proteoglycan 2 | MIM:142461 | Ensembl:ENSG00000142798 | HGNC:HGNC:5273 | PA29537 | 1p36.12 |
Gene Categories:
DRUGGABLE GENOMEGO terms in HSPG2
Term Type | Evidence Type | GO Term ID | GO Des. |
---|---|---|---|
MF | IEA | GO:0005509 | calcium ion binding |
MF | IPI | GO:0005515 | protein binding |
MF | IPI | GO:0008022 | protein C-terminus binding |
MF | HDA | GO:0030021 | extracellular matrix structural constituent conferring compression resistance |
MF | ISS | GO:0030021 | extracellular matrix structural constituent conferring compression resistance |
MF | TAS | GO:0050750 | low-density lipoprotein particle receptor binding |
BP | TAS | GO:0001523 | retinoid metabolic process |
BP | IEA | GO:0001525 | angiogenesis |
BP | TAS | GO:0006024 | glycosaminoglycan biosynthetic process |
BP | TAS | GO:0006027 | glycosaminoglycan catabolic process |
BP | TAS | GO:0006629 | lipid metabolic process |
BP | ISS | GO:0006898 | receptor-mediated endocytosis |
BP | TAS | GO:0006954 | inflammatory response |
BP | TAS | GO:0007420 | brain development |
BP | TAS | GO:0016525 | negative regulation of angiogenesis |
BP | TAS | GO:0030154 | cell differentiation |
BP | TAS | GO:0030198 | extracellular matrix organization |
BP | TAS | GO:0044267 | cellular protein metabolic process |
BP | TAS | GO:0072358 | cardiovascular system development |
CC | HDA | GO:0005576 | extracellular region |
CC | TAS | GO:0005576 | extracellular region |
CC | TAS | GO:0005604 | basement membrane |
CC | HDA | GO:0005615 | extracellular space |
CC | TAS | GO:0005796 | Golgi lumen |
CC | TAS | GO:0005886 | plasma membrane |
CC | HDA | GO:0005925 | focal adhesion |
CC | HDA | GO:0031012 | extracellular matrix |
CC | TAS | GO:0043202 | lysosomal lumen |
CC | HDA | GO:0062023 | collagen-containing extracellular matrix |
CC | HDA | GO:0062023 | collagen-containing extracellular matrix |
CC | ISS | GO:0062023 | collagen-containing extracellular matrix |
CC | HDA | GO:0070062 | extracellular exosome |
CC | TAS | GO:0098797 | plasma membrane protein complex |
Gene expression in normal tissue: HSPG2
Gene-model tissue-cancer distribution: Bubble Plot
Gene-drug pathway distribution
Pathways in HSPG2
Database | Pathway ID | Pathway Des. |
---|---|---|
kegg | hsa04512 | ECM-receptor interaction - Homo sapiens (human) |
kegg | hsa05161 | Hepatitis B - Homo sapiens (human) |
kegg | hsa05205 | Proteoglycans in cancer - Homo sapiens (human) |
reactome | R-HSA-1430728 | Metabolism |
reactome | R-HSA-1430728 | Metabolism |
reactome | R-HSA-1474228 | Degradation of the extracellular matrix |
reactome | R-HSA-1474228 | Degradation of the extracellular matrix |
reactome | R-HSA-1474244 | Extracellular matrix organization |
reactome | R-HSA-1474244 | Extracellular matrix organization |
reactome | R-HSA-162582 | Signal Transduction |
reactome | R-HSA-1630316 | Glycosaminoglycan metabolism |
reactome | R-HSA-1630316 | Glycosaminoglycan metabolism |
reactome | R-HSA-1638091 | Heparan sulfate/heparin (HS-GAG) metabolism |
reactome | R-HSA-1638091 | Heparan sulfate/heparin (HS-GAG) metabolism |
reactome | R-HSA-1643685 | Disease |
reactome | R-HSA-1793185 | Chondroitin sulfate/dermatan sulfate metabolism |
reactome | R-HSA-196854 | Metabolism of vitamins and cofactors |
reactome | R-HSA-1971475 | A tetrasaccharide linker sequence is required for GAG synthesis |
reactome | R-HSA-2022928 | HS-GAG biosynthesis |
reactome | R-HSA-2022928 | HS-GAG biosynthesis |
reactome | R-HSA-2024096 | HS-GAG degradation |
reactome | R-HSA-216083 | Integrin cell surface interactions |
reactome | R-HSA-2187338 | Visual phototransduction |
reactome | R-HSA-3000157 | Laminin interactions |
reactome | R-HSA-3000157 | Laminin interactions |
reactome | R-HSA-3000171 | Non-integrin membrane-ECM interactions |
reactome | R-HSA-3000171 | Non-integrin membrane-ECM interactions |
reactome | R-HSA-3000178 | ECM proteoglycans |
reactome | R-HSA-3560782 | Diseases associated with glycosaminoglycan metabolism |
reactome | R-HSA-3560783 | Defective B4GALT7 causes EDS, progeroid type |
reactome | R-HSA-3560801 | Defective B3GAT3 causes JDSSDHD |
reactome | R-HSA-3656237 | Defective EXT2 causes exostoses 2 |
reactome | R-HSA-3656253 | Defective EXT1 causes exostoses 1, TRPS2 and CHDS |
reactome | R-HSA-372790 | Signaling by GPCR |
reactome | R-HSA-3781865 | Diseases of glycosylation |
reactome | R-HSA-388396 | GPCR downstream signalling |
reactome | R-HSA-392499 | Metabolism of proteins |
reactome | R-HSA-418594 | G alpha (i) signalling events |
reactome | R-HSA-4420332 | Defective B3GALT6 causes EDSP2 and SEMDJL1 |
reactome | R-HSA-6806667 | Metabolism of fat-soluble vitamins |
reactome | R-HSA-71387 | Metabolism of carbohydrates |
reactome | R-HSA-71387 | Metabolism of carbohydrates |
reactome | R-HSA-975634 | Retinoid metabolism and transport |
reactome | R-HSA-977225 | Amyloid fiber formation |
Gene in drug-gene network: Network Plot
Gene-drug targets distribution
Gene Structure: PDB
Models in HSPG2