SNRPD2


Summary: The protein encoded by this gene belongs to the small nuclear ribonucleoprotein core protein family. It is required for pre-mRNA splicing and small nuclear ribonucleoprotein biogenesis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009].

NameOMIM IDEnsembl IDHGNC IDPHARMGKB IDMap Location
small nuclear ribonucleoprotein D2 polypeptideMIM:601061Ensembl:ENSG00000125743HGNC:HGNC:11159PA3600019q13.32

GO terms in SNRPD2


Term TypeEvidence TypeGO Term IDGO Des.
MFHDAGO:0003723RNA binding
MFIPIGO:0005515protein binding
CCTASGO:0005654nucleoplasm
CCTASGO:0005681spliceosomal complex
CCIBAGO:0005682U5 snRNP
CCIBAGO:0005685U1 snRNP
CCIDAGO:0005685U1 snRNP
CCIBAGO:0005686U2 snRNP
CCIDAGO:0005687U4 snRNP
CCIDAGO:0005689U12-type spliceosomal complex
CCIDAGO:0005829cytosol
CCTASGO:0005829cytosol
CCTASGO:0030532small nuclear ribonucleoprotein complex
CCIDAGO:0034709methylosome
CCIDAGO:0034715pICln-Sm protein complex
CCIDAGO:0034719SMN-Sm protein complex
CCIBAGO:0046540U4/U6 x U5 tri-snRNP complex
CCHDAGO:0070062extracellular exosome
CCIDAGO:0071007U2-type catalytic step 2 spliceosome
CCIBAGO:0071013catalytic step 2 spliceosome
CCIDAGO:0071013catalytic step 2 spliceosome
BPTASGO:0000245spliceosomal complex assembly
BPIBAGO:0000387spliceosomal snRNP assembly
BPIDAGO:0000387spliceosomal snRNP assembly
BPTASGO:0000387spliceosomal snRNP assembly
BPICGO:0000398mRNA splicing, via spliceosome
BPTASGO:0000398mRNA splicing, via spliceosome
BPTASGO:0008380RNA splicing
BPTASGO:0051170import into nucleus

Gene expression in normal tissue: SNRPD2

Gene-model tissue-cancer distribution: Bubble Plot

Gene-drug pathway distribution

Pathways in SNRPD2


DatabasePathway IDPathway Des.
wikipathwaysWP411mRNA Processing
netpathPathway_EGFR1EGFR1
kegghsa03040Spliceosome - Homo sapiens (human)
reactomeR-HSA-191859snRNP Assembly
reactomeR-HSA-194441Metabolism of non-coding RNA
reactomeR-HSA-72163mRNA Splicing - Major Pathway
reactomeR-HSA-72165mRNA Splicing - Minor Pathway
reactomeR-HSA-72172mRNA Splicing
reactomeR-HSA-72203Processing of Capped Intron-Containing Pre-mRNA
reactomeR-HSA-8953854Metabolism of RNA

Gene-Drug: Aster Plot


Drug IDDrug NameModel Num.
iGMDRD68Paclitaxel1

Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in SNRPD2

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