SNRPF
Summary:
Name | OMIM ID | Ensembl ID | HGNC ID | PHARMGKB ID | Map Location |
---|---|---|---|---|---|
small nuclear ribonucleoprotein polypeptide F | MIM:603541 | Ensembl:ENSG00000139343 | HGNC:HGNC:11162 | PA36003 | 12q23.1 |
GO terms in SNRPF
Term Type | Evidence Type | GO Term ID | GO Des. |
---|---|---|---|
CC | TAS | GO:0005654 | nucleoplasm |
CC | IDA | GO:0005681 | spliceosomal complex |
CC | IDA | GO:0005683 | U7 snRNP |
CC | IBA | GO:0005685 | U1 snRNP |
CC | IDA | GO:0005685 | U1 snRNP |
CC | IDA | GO:0005687 | U4 snRNP |
CC | IDA | GO:0005689 | U12-type spliceosomal complex |
CC | IEA | GO:0005732 | small nucleolar ribonucleoprotein complex |
CC | IDA | GO:0005829 | cytosol |
CC | TAS | GO:0005829 | cytosol |
CC | IDA | GO:0030532 | small nuclear ribonucleoprotein complex |
CC | IDA | GO:0034709 | methylosome |
CC | IDA | GO:0034715 | pICln-Sm protein complex |
CC | IDA | GO:0034719 | SMN-Sm protein complex |
CC | IDA | GO:0071007 | U2-type catalytic step 2 spliceosome |
CC | IBA | GO:0071013 | catalytic step 2 spliceosome |
CC | IDA | GO:0071013 | catalytic step 2 spliceosome |
BP | IDA | GO:0000387 | spliceosomal snRNP assembly |
BP | TAS | GO:0000387 | spliceosomal snRNP assembly |
BP | IBA | GO:0000398 | mRNA splicing, via spliceosome |
BP | IC | GO:0000398 | mRNA splicing, via spliceosome |
BP | TAS | GO:0000398 | mRNA splicing, via spliceosome |
BP | TAS | GO:0006369 | termination of RNA polymerase II transcription |
BP | TAS | GO:0008334 | histone mRNA metabolic process |
BP | IMP | GO:0008380 | RNA splicing |
BP | TAS | GO:0051170 | import into nucleus |
MF | IBA | GO:0003723 | RNA binding |
MF | IMP | GO:0003723 | RNA binding |
MF | IPI | GO:0005515 | protein binding |
Gene expression in normal tissue: SNRPF
Gene-model tissue-cancer distribution: Bubble Plot
Gene-drug pathway distribution
Pathways in SNRPF
Database | Pathway ID | Pathway Des. |
---|---|---|
wikipathways | WP411 | mRNA Processing |
kegg | hsa03040 | Spliceosome - Homo sapiens (human) |
reactome | R-HSA-109688 | Cleavage of Growing Transcript in the Termination Region |
reactome | R-HSA-111367 | SLBP independent Processing of Histone Pre-mRNAs |
reactome | R-HSA-191859 | snRNP Assembly |
reactome | R-HSA-194441 | Metabolism of non-coding RNA |
reactome | R-HSA-72163 | mRNA Splicing - Major Pathway |
reactome | R-HSA-72165 | mRNA Splicing - Minor Pathway |
reactome | R-HSA-72172 | mRNA Splicing |
reactome | R-HSA-72203 | Processing of Capped Intron-Containing Pre-mRNA |
reactome | R-HSA-73856 | RNA Polymerase II Transcription Termination |
reactome | R-HSA-73857 | RNA Polymerase II Transcription |
reactome | R-HSA-74160 | Gene expression (Transcription) |
reactome | R-HSA-75067 | Processing of Capped Intronless Pre-mRNA |
reactome | R-HSA-77588 | SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs |
reactome | R-HSA-8953854 | Metabolism of RNA |
Gene in drug-gene network: Network Plot
![](image/gene_network_legends.png)
Gene-drug targets distribution
Gene Structure: PDB
Models in SNRPF