CDKN2A


Summary: This gene generates several transcript variants which differ in their first exons. At least three alternatively spliced variants encoding distinct proteins have been reported, two of which encode structurally related isoforms known to function as inhibitors of CDK4 kinase. The remaining transcript includes an alternate first exon located 20 Kb upstream of the remainder of the gene; this transcript contains an alternate open reading frame (ARF) that specifies a protein which is structurally unrelated to the products of the other variants. This ARF product functions as a stabilizer of the tumor suppressor protein p53 as it can interact with, and sequester, the E3 ubiquitin-protein ligase MDM2, a protein responsible for the degradation of p53. In spite of the structural and functional differences, the CDK inhibitor isoforms and the ARF product encoded by this gene, through the regulatory roles of CDK4 and p53 in cell cycle G1 progression, share a common functionality in cell cycle G1 control. This gene is frequently mutated or deleted in a wide variety of tumors, and is known to be an important tumor suppressor gene. [provided by RefSeq, Sep 2012].

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GO terms in CDKN2A


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Term Type
Evidence Type
GO Term ID
GO Des.
BP IDA GO:0000082 G1/S transition of mitotic cell cycle
BP IMP GO:0001953 negative regulation of cell-matrix adhesion
BP IDA GO:0007050 cell cycle arrest
BP IMP GO:0007050 cell cycle arrest
BP IEP GO:0007265 Ras protein signal transduction
BP IDA GO:0008285 negative regulation of cell proliferation
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Gene expression in normal tissue: CDKN2A

Gene-model tissue-cancer distribution: Bubble Plot

Gene-drug pathway distribution

Pathways in CDKN2A


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Database
Pathway ID
Pathway Des.
biocarta arfpathway tumor suppressor arf inhibits ribosomal biogenesis
biocarta cellcyclepathway cyclins and cell cycle regulation
biocarta ctcfpathway ctcf: first multivalent nuclear factor
biocarta g1pathway cell cycle: g1/s check point
reactome R-HSA-1640170 Cell Cycle
reactome R-HSA-212436 Generic Transcription Pathway
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Gene-Drug: Aster Plot


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Drug ID
Drug Name
Model Num.
iGMDRD27 WHI-P97 1
iGMDRD50 Cytarabine 2
iGMDRD123 Isoevodiamine 1
iGMDRD1002 rTRAIL 1
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Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in CDKN2A

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Cancer
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