BPTF


Summary: This gene was identified by the reactivity of its encoded protein to a monoclonal antibody prepared against brain homogenates from patients with Alzheimer's disease. Analysis of the original protein (fetal Alz-50 reactive clone 1, or FAC1), identified as an 810 aa protein containing a DNA-binding domain and a zinc finger motif, suggested it might play a role in the regulation of transcription. High levels of FAC1 were detected in fetal brain and in patients with neurodegenerative diseases. The protein encoded by this gene is actually much larger than originally thought, and it also contains a C-terminal bromodomain characteristic of proteins that regulate transcription during proliferation. The encoded protein is highly similar to the largest subunit of the Drosophila NURF (nucleosome remodeling factor) complex. In Drosophila, the NURF complex, which catalyzes nucleosome sliding on DNA and interacts with sequence-specific transcription factors, is necessary for the chromatin remodeling required for transcription. Two alternative transcripts encoding different isoforms have been described completely. [provided by RefSeq, Jul 2008].

NameOMIM IDEnsembl IDHGNC IDPHARMGKB IDMap Location
bromodomain PHD finger transcription factorMIM:601819Ensembl:ENSG00000171634HGNC:HGNC:3581PA16237755717q24.2

GO terms in BPTF


Term TypeEvidence TypeGO Term IDGO Des.
CCIDAGO:0000790nuclear chromatin
CCIDAGO:0005634nucleus
CCIDAGO:0005654nucleoplasm
CCTASGO:0005737cytoplasm
CCIDAGO:0016589NURF complex
CCIEAGO:0030425dendrite
CCIEAGO:0044297cell body
CCIDAGO:0048188Set1C/COMPASS complex
CCIEAGO:0048471perinuclear region of cytoplasm
CCHDAGO:0070062extracellular exosome
BPIDAGO:0000122negative regulation of transcription by RNA polymerase II
BPIEAGO:0001892embryonic placenta development
BPIDAGO:0006338chromatin remodeling
BPIMPGO:0006351transcription, DNA-templated
BPIMPGO:0006355regulation of transcription, DNA-templated
BPIMPGO:0007420brain development
BPIEAGO:0007492endoderm development
BPIEAGO:0009611response to wounding
BPIEAGO:0009952anterior/posterior pattern specification
BPIMPGO:0045893positive regulation of transcription, DNA-templated
BPIEAGO:1990090cellular response to nerve growth factor stimulus
MFIPIGO:0005515protein binding
MFIDAGO:0008094DNA-dependent ATPase activity
MFIDAGO:0008134transcription factor binding
MFIEAGO:0035064methylated histone binding
MFIDAGO:0043565sequence-specific DNA binding
MFIMPGO:0043565sequence-specific DNA binding
MFIEAGO:0046872metal ion binding

Gene expression in normal tissue: BPTF

Gene-model tissue-cancer distribution: Bubble Plot

Gene-drug pathway distribution

Pathways in BPTF


DatabasePathway IDPathway Des.
wikipathwaysWP2853Endoderm Differentiation

Gene-Drug: Aster Plot


Drug IDDrug NameModel Num.
iGMDRD125BIRB-7961
iGMDRD504Obatoclax1
iGMDRD292NSC878771
iGMDRD700AUY9221
iGMDRD3PD-1730741

Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in BPTF

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