KRT5
Summary: The protein encoded by this gene is a member of the keratin gene family. The type II cytokeratins consist of basic or neutral proteins which are arranged in pairs of heterotypic keratin chains coexpressed during differentiation of simple and stratified epithelial tissues. This type II cytokeratin is specifically expressed in the basal layer of the epidermis with family member KRT14. Mutations in these genes have been associated with a complex of diseases termed epidermolysis bullosa simplex. The type II cytokeratins are clustered in a region of chromosome 12q12-q13. [provided by RefSeq, Jul 2008].
Name | OMIM ID | Ensembl ID | HGNC ID | PHARMGKB ID | Map Location |
---|---|---|---|---|---|
keratin 5 | MIM:148040 | Ensembl:ENSG00000186081 | HGNC:HGNC:6442 | PA30230 | 12q13.13 |
GO terms in KRT5
Term Type | Evidence Type | GO Term ID | GO Des. |
---|---|---|---|
CC | HDA | GO:0005634 | nucleus |
CC | IDA | GO:0005737 | cytoplasm |
CC | TAS | GO:0005829 | cytosol |
CC | IDA | GO:0005882 | intermediate filament |
CC | IEA | GO:0005886 | plasma membrane |
CC | HDA | GO:0016020 | membrane |
CC | IDA | GO:0045095 | keratin filament |
CC | HDA | GO:0070062 | extracellular exosome |
BP | IEA | GO:0007010 | cytoskeleton organization |
BP | TAS | GO:0008544 | epidermis development |
BP | TAS | GO:0031424 | keratinization |
BP | TAS | GO:0031581 | hemidesmosome assembly |
BP | TAS | GO:0070268 | cornification |
MF | TAS | GO:0005200 | structural constituent of cytoskeleton |
MF | IPI | GO:0005515 | protein binding |
MF | IPI | GO:0097110 | scaffold protein binding |
Gene expression in normal tissue: KRT5
Gene-model tissue-cancer distribution: Bubble Plot
Gene-drug pathway distribution
Pathways in KRT5
Database | Pathway ID | Pathway Des. |
---|---|---|
reactome | R-HSA-1266738 | Developmental Biology |
reactome | R-HSA-1500931 | Cell-Cell communication |
reactome | R-HSA-446107 | Type I hemidesmosome assembly |
reactome | R-HSA-446728 | Cell junction organization |
reactome | R-HSA-6805567 | Keratinization |
reactome | R-HSA-6809371 | Formation of the cornified envelope |
netpath | Pathway_EGFR1 | EGFR1 |
pid | deltanp63pathway | Validated transcriptional targets of deltaNp63 isoforms |
pid | reg_gr_pathway | Glucocorticoid receptor regulatory network |
Gene in drug-gene network: Network Plot
Gene-drug targets distribution
Gene Structure: PDB
Models in KRT5