FIP1L1


Summary: This gene encodes a subunit of the CPSF (cleavage and polyadenylation specificity factor) complex that polyadenylates the 3' end of mRNA precursors. This gene, the homolog of yeast Fip1 (factor interacting with PAP), binds to U-rich sequences of pre-mRNA and stimulates poly(A) polymerase activity. Its N-terminus contains a PAP-binding site and its C-terminus an RNA-binding domain. An interstitial chromosomal deletion on 4q12 creates an in-frame fusion of human genes FIP1L1 and PDGFRA (platelet-derived growth factor receptor, alpha). The FIP1L1-PDGFRA fusion gene encodes a constitutively activated tyrosine kinase that joins the first 233 amino acids of FIP1L1 to the last 523 amino acids of PDGFRA. This gene fusion and chromosomal deletion is the cause of some forms of idiopathic hypereosinophilic syndrome (HES). This syndrome, recently reclassified as chronic eosinophilic leukemia (CEL), is responsive to treatment with tyrosine kinase inhibitors. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Oct 2008].

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Gene Categories:

CLINICALLY ACTIONABLE

GO terms in FIP1L1


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Term Type
Evidence Type
GO Term ID
GO Des.
MF HDA GO:0003723 RNA binding
MF IBA GO:0003723 RNA binding
MF IPI GO:0005515 protein binding
CC IDA GO:0005654 nucleoplasm
CC TAS GO:0005654 nucleoplasm
CC IBA GO:0005847 mRNA cleavage and polyadenylation specificity factor complex
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Gene expression in normal tissue: FIP1L1

Gene-model tissue-cancer distribution: Bubble Plot

Gene-drug pathway distribution

Pathways in FIP1L1


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Database
Pathway ID
Pathway Des.
kegg hsa03015 mRNA surveillance pathway - Homo sapiens (human)
reactome R-HSA-109688 Cleavage of Growing Transcript in the Termination Region
reactome R-HSA-159231 Transport of Mature mRNA Derived from an Intronless Transcript
reactome R-HSA-159234 Transport of Mature mRNAs Derived from Intronless Transcripts
reactome R-HSA-72163 mRNA Splicing - Major Pathway
reactome R-HSA-72172 mRNA Splicing
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Gene-Drug: Aster Plot


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Drug ID
Drug Name
Model Num.
iGMDRD57 Chloropentafluorobenzene 3
iGMDRD229 B02 3
iGMDRD367 Ro 28-1675 3
iGMDRD71 Sparfosic acid 3
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Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in FIP1L1

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Cancer
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