IDH1


Summary: Isocitrate dehydrogenases catalyze the oxidative decarboxylation of isocitrate to 2-oxoglutarate. These enzymes belong to two distinct subclasses, one of which utilizes NAD(+) as the electron acceptor and the other NADP(+). Five isocitrate dehydrogenases have been reported: three NAD(+)-dependent isocitrate dehydrogenases, which localize to the mitochondrial matrix, and two NADP(+)-dependent isocitrate dehydrogenases, one of which is mitochondrial and the other predominantly cytosolic. Each NADP(+)-dependent isozyme is a homodimer. The protein encoded by this gene is the NADP(+)-dependent isocitrate dehydrogenase found in the cytoplasm and peroxisomes. It contains the PTS-1 peroxisomal targeting signal sequence. The presence of this enzyme in peroxisomes suggests roles in the regeneration of NADPH for intraperoxisomal reductions, such as the conversion of 2, 4-dienoyl-CoAs to 3-enoyl-CoAs, as well as in peroxisomal reactions that consume 2-oxoglutarate, namely the alpha-hydroxylation of phytanic acid. The cytoplasmic enzyme serves a significant role in cytoplasmic NADPH production. Alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Sep 2013].

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Gene Categories:

CLINICALLY ACTIONABLE

GO terms in IDH1


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Term Type
Evidence Type
GO Term ID
GO Des.
MF IDA GO:0000287 magnesium ion binding
MF EXP GO:0004450 isocitrate dehydrogenase (NADP+) activity
MF IDA GO:0004450 isocitrate dehydrogenase (NADP+) activity
MF IPI GO:0005102 signaling receptor binding
MF IPI GO:0042802 identical protein binding
MF IPI GO:0042803 protein homodimerization activity
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Gene expression in normal tissue: IDH1

16 tissues mixtureadiposeadrenalbrainbreastcolonheartkidneyliverlunglymph nodeovaryprostateskeletal muscletestesthyroidwhite blood cells

Gene-model tissue-cancer distribution: Bubble Plot

Gene-drug pathway distribution

undefined40ERK MAPK signaling3VEGF signaling pathway2Cell cycle2Metabolism1Cytoskeleton1PI3K/MTOR signaling1Stilbenoid, diarylheptanoid and gingerol biosynthesis1DNA replication1ABL signaling1

Pathways in IDH1


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Database
Pathway ID
Pathway Des.
wikipathways WP100 Glutathione metabolism
wikipathways WP2002 miR-targeted genes in epithelium - TarBase
wikipathways WP2003 miR-targeted genes in leukocytes - TarBase
wikipathways WP2004 miR-targeted genes in lymphocytes - TarBase
wikipathways WP2006 miR-targeted genes in squamous cell - TarBase
wikipathways WP2453 TCA Cycle and Deficiency of Pyruvate Dehydrogenase complex (PDHc)
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Gene-Drug: Aster Plot


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Drug ID
Drug Name
Model Num.
iGMDRD74 Idarubicin 6
iGMDRD399 Selumetinib 4
iGMDRD922 IDH1 inhibitor 3
iGMDRD190 Nilotinib 1
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Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in IDH1

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