CBFB


Summary: The protein encoded by this gene is the beta subunit of a heterodimeric core-binding transcription factor belonging to the PEBP2/CBF transcription factor family which master-regulates a host of genes specific to hematopoiesis (e.g., RUNX1) and osteogenesis (e.g., RUNX2). The beta subunit is a non-DNA binding regulatory subunit; it allosterically enhances DNA binding by alpha subunit as the complex binds to the core site of various enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers and GM-CSF promoters. Alternative splicing generates two mRNA variants, each encoding a distinct carboxyl terminus. In some cases, a pericentric inversion of chromosome 16 [inv(16)(p13q22)] produces a chimeric transcript consisting of the N terminus of core-binding factor beta in a fusion with the C-terminal portion of the smooth muscle myosin heavy chain 11. This chromosomal rearrangement is associated with acute myeloid leukemia of the M4Eo subtype. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008].

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OMIM ID
Ensembl ID
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Gene Categories:

CLINICALLY ACTIONABLE

GO terms in CBFB


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Term Type
Evidence Type
GO Term ID
GO Des.
MF ISM GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
MF NAS GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
MF IBA GO:0003677 DNA binding
MF TAS GO:0003700 DNA-binding transcription factor activity
MF IBA GO:0003712 transcription coregulator activity
MF IEA GO:0003713 transcription coactivator activity
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Gene expression in normal tissue: CBFB

Gene-model tissue-cancer distribution: Bubble Plot

undefinetissue: undefine cancer: undefined model num: 0undefinedtissue: undefined cancer: PANCAN model num: 18LUNtissue: LUN cancer: LUNG model num: 0LUNGtissue: LUNG cancer: undefined model num: 9

Gene-drug pathway distribution

undefined3p53 pathway1Mitosis1Genome integrity1DNA replication1Protein stability and degradation1

Pathways in CBFB


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Database
Pathway ID
Pathway Des.
reactome R-HSA-162582 Signal Transduction
reactome R-HSA-212436 Generic Transcription Pathway
reactome R-HSA-212436 Generic Transcription Pathway
reactome R-HSA-73857 RNA Polymerase II Transcription
reactome R-HSA-73857 RNA Polymerase II Transcription
reactome R-HSA-74160 Gene expression (Transcription)
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Gene-Drug: Aster Plot


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Drug ID
Drug Name
Model Num.
iGMDRD158 NSC141540 3
iGMDRD248 BRD4354 3
iGMDRD532 Olaparib 3
iGMDRD871 BRD6368 6
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Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in CBFB

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Model
Level
Reference ID
Tissue
Cancer
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Clinical Response
Source
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