TAF1


Summary: Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is the basal transcription factor TFIID, which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes the largest subunit of TFIID. This subunit binds to core promoter sequences encompassing the transcription start site. It also binds to activators and other transcriptional regulators, and these interactions affect the rate of transcription initiation. This subunit contains two independent protein kinase domains at the N- and C-terminals, but also possesses acetyltransferase activity and can act as a ubiquitin-activating/conjugating enzyme. Mutations in this gene result in Dystonia 3, torsion, X-linked, a dystonia-parkinsonism disorder. Alternative splicing of this gene results in multiple transcript variants. This gene is part of a complex transcription unit (TAF1/DYT3), wherein some transcript variants share exons with TAF1 as well as additional downstream DYT3 exons. [provided by RefSeq, Oct 2013].

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GO terms in TAF1


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Term Type
Evidence Type
GO Term ID
GO Des.
CC IDA GO:0000790 nuclear chromatin
CC IDA GO:0005634 nucleus
CC IDA GO:0005654 nucleoplasm
CC IDA GO:0005654 nucleoplasm
CC TAS GO:0005654 nucleoplasm
CC IPI GO:0005667 transcription factor complex
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Gene expression in normal tissue: TAF1

16 tissues mixtureadiposeadrenalbrainbreastcolonheartkidneyliverlunglymph nodeovaryprostateskeletal muscletestesthyroidwhite blood cells

Gene-model tissue-cancer distribution: Bubble Plot

undefinetissue: undefine cancer: undefined model num: 0undefinedtissue: undefined cancer: PANCAN model num: 42undefinedtissue: undefined cancer: ADENOCARCINOMA model num: 6LUNtissue: LUN cancer: LUNG model num: 0LUNGtissue: LUNG cancer: undefined model num: 21OVARtissue: OVAR cancer: OVARY model num: 0OVARYtissue: OVARY cancer: undefined model num: 4UTERUtissue: UTERU cancer: UTERUS model num: 0UTERUStissue: UTERUS cancer: Endometrial Carcinoma (UCEC) model num: 3BLOOtissue: BLOO cancer: BLOOD model num: 0BLOODtissue: BLOOD cancer: undefined model num: 12BOWEtissue: BOWE cancer: BOWEL model num: 0BOWELtissue: BOWEL cancer: undefined model num: 10

Gene-drug pathway distribution

undefined25DNA replication1Ferroptosis1Longevity regulating pathway1Apoptosis regulation1Biosynthesis of secondary metabolites1Other, kinases1ERK MAPK signaling1

Pathways in TAF1


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Database
Pathway ID
Pathway Des.
biocarta p53hypoxiapathway hypoxia and p53 in the cardiovascular system
reactome R-HSA-162587 HIV Life Cycle
reactome R-HSA-162599 Late Phase of HIV Life Cycle
reactome R-HSA-162906 HIV Infection
reactome R-HSA-1643685 Disease
reactome R-HSA-167161 HIV Transcription Initiation
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Gene-Drug: Aster Plot


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Drug ID
Drug Name
Model Num.
iGMDRD870 BRD63610 1
iGMDRD255 SB225002 3
iGMDRD138 PX 12 2
iGMDRD268 Cerulenin 2
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Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in TAF1

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Level
Reference ID
Tissue
Cancer
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No matching records found

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