NUP98


Summary: Nuclear pore complexes (NPCs) regulate the transport of macromolecules between the nucleus and cytoplasm, and are composed of many polypeptide subunits, many of which belong to the nucleoporin family. This gene belongs to the nucleoporin gene family and encodes a 186 kDa precursor protein that undergoes autoproteolytic cleavage to generate a 98 kDa nucleoporin and 96 kDa nucleoporin. The 98 kDa nucleoporin contains a Gly-Leu-Phe-Gly (GLGF) repeat domain and participates in many cellular processes, including nuclear import, nuclear export, mitotic progression, and regulation of gene expression. The 96 kDa nucleoporin is a scaffold component of the NPC. Proteolytic cleavage is important for targeting of the proteins to the NPC. Translocations between this gene and many other partner genes have been observed in different leukemias. Rearrangements typically result in chimeras with the N-terminal GLGF domain of this gene to the C-terminus of the partner gene. Alternative splicing results in multiple transcript variants encoding different isoforms, at least two of which are proteolytically processed. Some variants lack the region that encodes the 96 kDa nucleoporin. [provided by RefSeq, Feb 2016].

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Name
OMIM ID
Ensembl ID
HGNC ID
PHARMGKB ID
Map Location
OMIM IDMIM:601021
PHARMGKB IDPA31856
Map Location11p15.4

Gene Categories:

TRANSPORTERPROTEASE

GO terms in NUP98


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Term Type
Evidence Type
GO Term ID
GO Des.
MF IMP GO:0003713 transcription coactivator activity
MF IBA GO:0003723 RNA binding
MF IMP GO:0003729 mRNA binding
MF TAS GO:0005215 transporter activity
MF IPI GO:0005515 protein binding
MF IBA GO:0008139 nuclear localization sequence binding
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Gene expression in normal tissue: NUP98

Gene-model tissue-cancer distribution: Bubble Plot

Gene-drug pathway distribution

undefined22Apoptosis regulation3DNA replication1Chromatin histone acetylation1Th17 cell differentiation1ERK MAPK signaling1Cell cycle1IGFR signaling1

Pathways in NUP98


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Database
Pathway ID
Pathway Des.
reactome R-HSA-1169408 ISG15 antiviral mechanism
reactome R-HSA-1169410 Antiviral mechanism by IFN-stimulated genes
reactome R-HSA-1280215 Cytokine Signaling in Immune system
reactome R-HSA-141424 Amplification of signal from the kinetochores
reactome R-HSA-141444 Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
reactome R-HSA-1430728 Metabolism
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Gene-Drug: Aster Plot


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Drug ID
Drug Name
Model Num.
iGMDRD446 LY 2183240 5
iGMDRD351 GW843682X 1
iGMDRD57 Chloropentafluorobenzene 2
iGMDRD639 YK 4-279 2
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Gene in drug-gene network: Network Plot

Gene-drug targets distribution

Gene Structure: PDB

Models in NUP98

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Model
Level
Reference ID
Tissue
Cancer
Drug
Clinical Response
Source
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